HVGERM: Human IGHV germlines
In piglet: Program for Inferring Immunoglobulin Allele Similarity Clusters and Genotypes
HVGERM R Documentation
Human IGHV germlines
Description
A character vector of all 498 human IGHV germline gene segment alleles
in IMGT Gene-db release July 2022, with an additional 25 undocumented alleles from VDJbase.
Usage
HVGERM
Format
Values correspond to IMGT-gaped nuceltoide sequences (with
nucleotides capitalized and gaps represented by '.').
References
Xochelli et al. (2014) Immunoglobulin heavy variable
(IGHV) genes and alleles: new entities, new names and implications for
research and prognostication in chronic lymphocytic leukaemia.
Immunogenetics. 67(1):61-6.
piglet documentation built on April 12, 2025, 1:27 a.m.
R Package Documentation
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| HVGERM | R Documentation |
Human IGHV germlines
Description
A character vector of all 498 human IGHV germline gene segment alleles
in IMGT Gene-db release July 2022, with an additional 25 undocumented alleles from VDJbase.
Usage
HVGERM
Format
Values correspond to IMGT-gaped nuceltoide sequences (with nucleotides capitalized and gaps represented by '.').
References
Xochelli et al. (2014) Immunoglobulin heavy variable (IGHV) genes and alleles: new entities, new names and implications for research and prognostication in chronic lymphocytic leukaemia. Immunogenetics. 67(1):61-6.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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