read_protti: Read, clean and convert

In protti: Bottom-Up Proteomics and LiP-MS Quality Control and Data Analysis Tools

Read, clean and convert

Description

The function uses the very fast fread function form the data.table package. The column names of the resulting data table are made more r-friendly using clean_names from the janitor package. It replaces "." and " " with "_" and converts names to lower case which is also known as snake_case. In the end the data table is converted to a tibble.

Usage

read_protti(filename, ...)

Arguments

filename	a character value that specifies the path to the file.
...	additional arguments for the fread function.

Value

A data frame (with class tibble) that contains the content of the specified file.

Examples

## Not run: 
read_protti("folder\\filename")

## End(Not run)

protti documentation built on Jan. 22, 2023, 1:11 a.m.