treatment_enrichment: Check treatment enrichment
In protti: Bottom-Up Proteomics and LiP-MS Quality Control and Data Analysis Tools
View source: R/calculate_treatment_enrichment.R
treatment_enrichment R Documentation
Check treatment enrichment
Description
![[Deprecated]](../help/figures/lifecycle-deprecated.svg)
This function was deprecated due to its name changing to calculate_treatment_enrichment().
Usage
treatment_enrichment(...)
Value
A bar plot displaying the percentage of all detect proteins and all significant proteins
that bind to the treatment. A Fisher's exact test is performed to calculate the significance of
the enrichment in significant proteins compared to all proteins. The result is reported as a
p-value. If plot = FALSE a contingency table in long format is returned.
protti documentation built on Oct. 22, 2024, 1:06 a.m.
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View source: R/calculate_treatment_enrichment.R
| treatment_enrichment | R Documentation |
Check treatment enrichment
Description
This function was deprecated due to its name changing to calculate_treatment_enrichment().
Usage
treatment_enrichment(...)
Value
A bar plot displaying the percentage of all detect proteins and all significant proteins
that bind to the treatment. A Fisher's exact test is performed to calculate the significance of
the enrichment in significant proteins compared to all proteins. The result is reported as a
p-value. If plot = FALSE a contingency table in long format is returned.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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