max_compare_geno: Find pair with most similar genotypes
In qtl2: Quantitative Trait Locus Mapping in Experimental Crosses
max_compare_geno R Documentation
Find pair with most similar genotypes
Description
From results of compare_geno(), show the pair with most similar genotypes.
Usage
max_compare_geno(object, ...)
## S3 method for class 'compare_geno'
max(object, ...)
Arguments
object
A square matrix with genotype comparisons for pairs
of individuals, as output by compare_geno().
...
Ignored
Value
Data frame with individual pair, proportion matches, number
of mismatches, number of matches, and total markers genotyped.
Examples
grav2 <- read_cross2(system.file("extdata", "grav2.zip", package="qtl2"))
cg <- compare_geno(grav2)
max(cg)
qtl2 documentation built on May 29, 2024, 11:46 a.m.
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| max_compare_geno | R Documentation |
Find pair with most similar genotypes
Description
From results of compare_geno(), show the pair with most similar genotypes.
Usage
max_compare_geno(object, ...)
## S3 method for class 'compare_geno'
max(object, ...)
Arguments
object |
A square matrix with genotype comparisons for pairs
of individuals, as output by |
... |
Ignored |
Value
Data frame with individual pair, proportion matches, number of mismatches, number of matches, and total markers genotyped.
Examples
grav2 <- read_cross2(system.file("extdata", "grav2.zip", package="qtl2"))
cg <- compare_geno(grav2)
max(cg)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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