reduce_map_gaps: Reduce the lengths of gaps in a map
In qtl2: Quantitative Trait Locus Mapping in Experimental Crosses
View source: R/reduce_map_gaps.R
reduce_map_gaps R Documentation
Reduce the lengths of gaps in a map
Description
Reduce the lengths of gaps in a map
Usage
reduce_map_gaps(map, min_gap = 50)
Arguments
map
Genetic map as a list of vectors (each vector is a
chromosome and contains the marker positions).
min_gap
Minimum gap length to return.
Value
Input map with any gaps greater than min_gap reduced to min_gap.
See Also
find_map_gaps()
Examples
iron <- read_cross2(system.file("extdata", "iron.zip", package="qtl2"))
rev_map <- reduce_map_gaps(iron$gmap, 30)
qtl2 documentation built on May 29, 2024, 11:46 a.m.
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View source: R/reduce_map_gaps.R
| reduce_map_gaps | R Documentation |
Reduce the lengths of gaps in a map
Description
Reduce the lengths of gaps in a map
Usage
reduce_map_gaps(map, min_gap = 50)
Arguments
map |
Genetic map as a list of vectors (each vector is a chromosome and contains the marker positions). |
min_gap |
Minimum gap length to return. |
Value
Input map with any gaps greater than min_gap reduced to min_gap.
See Also
find_map_gaps()
Examples
iron <- read_cross2(system.file("extdata", "iron.zip", package="qtl2"))
rev_map <- reduce_map_gaps(iron$gmap, 30)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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