Man pages for ragt2ridges
Ridge Estimation of Vector Auto-Regressive (VAR) Processes
| array2longitudinal | Convert a time-series array to a longitudinal-object. |
| centerVAR1data | Zero-centering of time-course data |
| CIGofVAR1 | Conditional independence graphs of the VAR(1) model |
| CIGofVAR2 | Conditional independence graphs of the VAR(2) model |
| createA | Generation of the VAR(1) autoregression coefficient matrix. |
| dataVAR1 | Sample data from a VAR(1) model |
| dataVAR2 | Sample data from a VAR(2) model |
| dataVARX1 | Sample data from a VARX(1) model |
| evaluateVAR1fit | Visualize the fit of a VAR(1) model |
| graphVAR1 | Graphs of the temporal (or contemporaneous) relations implied... |
| graphVAR2 | Graphs of the temporal (or contemporaneous) relations implied... |
| graphVARX1 | Graphs of the temporal (or contemporaneous) relations implied... |
| hpvP35 | Time-course P53 pathway data |
| impulseResponseVAR1 | Impulse response analysis of the VAR(1) model |
| impulseResponseVAR2 | Impulse response analysis of the VAR(2) model |
| impulseResponseVARX1 | Impulse response analysis of the VARX(1) model |
| loglikLOOCVcontourVAR1 | Contourplot of LOOCV log-likelihood of VAR(1) model |
| loglikLOOCVcontourVAR1fused | Contourplot of LOOCV log-likelihood of multiple VAR(1) models |
| loglikLOOCVcontourVAR2 | Contourplot of LOOCV log-likelihood of the VAR(2) model |
| loglikLOOCVcontourVARX1 | Contourplot of the LOOCV log-likelihood of VARX(1) model |
| loglikLOOCVVAR1 | Leave-one-out (minus) cross-validated log-likelihood of... |
| loglikLOOCVVAR1fused | Leave-one-out (minus) cross-validated log-likelihood of... |
| loglikLOOCVVAR2 | Leave-one-out (minus) cross-validated log-likelihood of... |
| loglikLOOCVVARX1 | Leave-one-out (minus) cross-validated log-likelihood of... |
| loglikVAR1 | Log-likelihood of the VAR(1) model. |
| longitudinal2array | Convert a longitudinal object into an array. |
| motifStatsVAR1 | Network motif detection for the VAR(1) model. |
| mutualInfoVAR1 | Mutual information analysis of the VAR(1) model |
| mutualInfoVAR2 | Mutual information analysis of the VAR(2) model |
| nodeStatsVAR1 | VAR(1) model node statistics |
| nodeStatsVAR2 | VAR(2) model node statistics |
| optPenaltyVAR1 | Automatic penalty parameter selection for the VAR(1) model. |
| optPenaltyVAR1fused | Automatic penalty parameter selection for multiple VAR(1)... |
| optPenaltyVAR2 | Automatic penalty parameter selection for the VAR(2) model. |
| optPenaltyVARX1 | Automatic penalty parameter selection for the VARX(1) model. |
| plotVAR1data | Time series plot |
| pruneMotifStats | Network motif list subsetting. |
| ragt2ridges-package | Ridge Estimation of Vector Auto-Regressive (VAR) Processes |
| ridgePathVAR1 | Visualize the ridge regularization paths of the parameters of... |
| ridgeVAR1 | Ridge ML estimation of the VAR(1) model |
| ridgeVAR1fused | Fused ridge ML estimation of multiple VAR(1) model |
| ridgeVAR2 | Ridge ML estimation of the VAR(2) model |
| ridgeVARX1 | Ridge ML estimation of the VARX(1) model |
| sparsifyVAR1 | Function that determines the support of autoregression... |
| sparsifyVAR2 | Function that determines the support of autoregression... |
| sparsifyVARX1 | Function that determines the support of (auto)regression... |
