refdb_export_mothur: Export reference database for Mothur
In refdb: A DNA Reference Library Manager
refdb_export_mothur R Documentation
Export reference database for Mothur
Description
Write a reference database in formats which can be used
with Mothur.
Usage
refdb_export_mothur(x, file)
Arguments
x
a reference database.
file
a file path. This will be used to create
a .fasta file and a .txt file.
Value
No return value, called for side effects.
Examples
lib <- read.csv(system.file("extdata", "baetidae_bold.csv", package = "refdb"))
lib <- refdb_set_fields_BOLD(lib)
refdb_export_mothur(lib, tempfile())
refdb documentation built on Sept. 22, 2022, 5:07 p.m.
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| refdb_export_mothur | R Documentation |
Export reference database for Mothur
Description
Write a reference database in formats which can be used
with Mothur.
Usage
refdb_export_mothur(x, file)
Arguments
x |
a reference database. |
file |
a file path. This will be used to create a .fasta file and a .txt file. |
Value
No return value, called for side effects.
Examples
lib <- read.csv(system.file("extdata", "baetidae_bold.csv", package = "refdb"))
lib <- refdb_set_fields_BOLD(lib)
refdb_export_mothur(lib, tempfile())
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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