API for rehh
Searching for Footprints of Selection using 'Extended Haplotype Homozygosity' Based Tests
| Global functions | |
|---|---|
| allelefurcation | Man page |
| allelefurcation-class | Man page |
| as.newick | Man page Source code |
| calc_candidate_regions | Man page Source code |
| calc_ehh | Man page Source code |
| calc_ehhs | Man page Source code |
| calc_furcation | Man page Source code |
| calc_haplen | Man page Source code |
| calc_node_size | Source code |
| calc_pairwise_haplen | Man page Source code |
| calc_region_stats | Man page Source code |
| calc_sfs_tests | Man page Source code |
| calc_y | Source code |
| check_chromosome_names | Source code |
| chr.name | Man page |
| chr.name, | Man page |
| chr.name,haplohh-method | Man page |
| data2haplohh | Man page Source code |
| distribplot | Man page Source code |
| draw_tree | Source code |
| ehh | Man page |
| ehh-class | Man page |
| ehhs | Man page |
| ehhs-class | Man page |
| extract_regions | Man page Source code |
| freqbinplot | Man page Source code |
| ftree | Man page |
| ftree-class | Man page |
| furcation | Man page |
| furcation-class | Man page |
| get_description | Source code |
| get_description_colors | Source code |
| hap.names | Man page |
| hap.names, | Man page |
| hap.names,haplohh-method | Man page |
| haplen | Man page |
| haplen-class | Man page |
| haplo | Man page |
| haplo, | Man page |
| haplo,haplohh-method | Man page |
| haplohh-class | Man page |
| haplohh2sweepfinder | Man page Source code |
| haplohh_cgu_bta12 | Man page |
| ies2xpehh | Man page Source code |
| ihh2ihs | Man page Source code |
| ines2rsb | Man page Source code |
| is.allelefurcation | Source code |
| is.ehh | Source code |
| is.ehhs | Source code |
| is.fastPhase | Source code |
| is.ftree | Source code |
| is.furcation | Source code |
| is.haplen | Source code |
| is.haplohh | Source code |
| is.ms | Source code |
| is.vcf | Source code |
| make.example.files | Man page Source code |
| manhattanplot | Man page Source code |
| mrk.names | Man page |
| mrk.names, | Man page |
| mrk.names,haplohh-method | Man page |
| nhap | Man page |
| nhap, | Man page |
| nhap,haplohh-method | Man page |
| nmrk | Man page |
| nmrk, | Man page |
| nmrk,haplohh-method | Man page |
| plot.ehh | Man page Source code |
| plot.ehhs | Man page Source code |
| plot.furcation | Man page Source code |
| plot.haplen | Man page Source code |
| plot.haplohh | Man page Source code |
| positions | Man page |
| positions, | Man page |
| positions,haplohh-method | Man page |
| prune_tree | Source code |
| read.fastPhase | Source code |
| read.ms | Source code |
| read.standard | Source code |
| read.transposed | Source code |
| read.vcf | Source code |
| rehh | Man page |
| rehh-package | Man page |
| remove.example.files | Man page Source code |
| scan_hh | Man page Source code |
| scan_hh_full | Man page Source code |
| subset.haplohh | Man page Source code |
| update_haplohh | Man page Source code |
