Files in retrocombinator
Simulating the Molecular Evolutionary Process of Retrotransposon Recombination

MD5
NEWS.md README.md
NAMESPACE
DESCRIPTION
R/RcppExports.R R/simulateEvolution.R R/helper.R R/retrocombinator.R R/params.R R/parseSimulationOutput.R R/visualise.R
src/sequence.cpp
src/point_mutation_models.cpp
src/burster.h
src/rcpp_simulation.cpp
src/RcppExports.cpp
src/exception.h
src/rand_maths.h
src/families.h
src/simulation.cpp
src/activity_tracker.h
src/mutator.h
src/output.cpp
src/mutator.cpp
src/activity_tracker.cpp
src/families.cpp
src/output.h
src/pool.h
src/simulation.h
src/representative.cpp
src/sequence.h
src/point_mutation_models.h
src/utilities.cpp
src/burster.cpp
src/constants.h
src/rand_maths.cpp
src/pool.cpp
src/utilities.h
src/representative.h
src/cpp/main.cpp
src/test/test_point_mutation_models.h
src/test/test_sequence.h
src/test/test_simulation.expected
src/test/test_simulation.h
src/test/test_mutator.h
src/test/test_utilities.h
src/test/test_header.h
src/test/test_pool.h
src/test/test_activity_tracker.h
src/test/test.cpp
src/test/test_rand_maths.h
inst/doc/simulations.Rmd inst/doc/simulations.R inst/doc/simulations.pdf
inst/testdata/test_parser_expected.rds
inst/testdata/test_simulation.test
build/vignette.rds
tests/testthat.R tests/testthat/test_parser.R vignettes/simulations.Rmd man/retrocombinator-package.Rd man/RecombParams.Rd man/MutationParams.Rd man/plotEvolution.Rd man/SelectionParams.Rd man/FamilyParams.Rd man/parseSimulationOutput.Rd man/is.ActivityParams.Rd man/ActivityParams.Rd man/simulateEvolution.Rd man/SimulationParams.Rd man/SequenceParams.Rd man/BurstParams.Rd man/is.FamilyParams.Rd man/is.SequenceParams.Rd man/is.OutputParams.Rd man/is.RecombParams.Rd man/is.SeedParams.Rd man/is.BurstParams.Rd man/is.SelectionParams.Rd man/is.SimulationParams.Rd man/OutputParams.Rd man/is.MutationParams.Rd man/SeedParams.Rd
retrocombinator documentation built on Nov. 12, 2021, 1:07 a.m.