MutationParams: Create MutationParams object
In retrocombinator: Simulating the Molecular Evolutionary Process of Retrotransposon Recombination
Description
Usage
Arguments
Value
Examples
Description
Create MutationParams object
Usage
1
MutationParams(model = "K80")
Arguments
model
Which point mutation/substitution model will be used to modify
the sequences during the simulation? Options are "JC69" (Jules and Cantor
1969), "K80" (Kimura 1980), "F81" (Felsenstein 1981), "HKY85" (Hasegawa,
Kishino and Yano, 1985), "TN93" (Timura and Nei 1993), or "GTR" (General Time
Reversible Model, Tavaré 1986), note however that "GTR" is currently
unsupported.
Value
A bundling of the parameters given to it as a MutationParams object
Examples
1
mutationParams <- MutationParams(model = 'F81')
retrocombinator documentation built on Nov. 12, 2021, 1:07 a.m.
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Description Usage Arguments Value Examples
Description
Create MutationParams object
Usage
1 | MutationParams(model = "K80")
|
Arguments
model |
Which point mutation/substitution model will be used to modify the sequences during the simulation? Options are "JC69" (Jules and Cantor 1969), "K80" (Kimura 1980), "F81" (Felsenstein 1981), "HKY85" (Hasegawa, Kishino and Yano, 1985), "TN93" (Timura and Nei 1993), or "GTR" (General Time Reversible Model, Tavaré 1986), note however that "GTR" is currently unsupported. |
Value
A bundling of the parameters given to it as a MutationParams object
Examples
1 | mutationParams <- MutationParams(model = 'F81')
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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