plotEvolution: Plotting function wrapper

Description Usage Arguments Value Examples

View source: R/visualise.R

Description

Plotting function wrapper

Usage

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Arguments

data

Simulation output data obtained from [retrocombinator::parseEvolutionOutput()()]

type

What should be plotted?

"initial"

Plot similarity to initial sequence over time.

"pairwise"

Plot the similarity between sequences over time.

"families"

Plot the evolution of families over time.

...

Any additional arguments to pass to specialised plotting functions (currently unused)

Value

A corresponding evolutionary history plot, based on the simulation of the evolution of retrotransposons

Examples

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## Not run: 
plotEvolution(myData, "initial")

## End(Not run)

retrocombinator documentation built on Nov. 12, 2021, 1:07 a.m.