ced: Compositional error deviation

Description Usage Arguments Details Value Author(s) References See Also Examples

View source: R/ced.R

Description

Normalized Aitchison distance between two data sets

Usage

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ced(x, y, ni)

Arguments

x

matrix or data frame

y

matrix or data frame of the same size as x

ni

normalization parameter. See details below.

Details

This function has been mainly written for procudures that evaluate imputation or replacement of rounded zeros. The ni parameter can thus, e.g. be used for expressing the number of rounded zeros.

Value

the compositinal error distance

Author(s)

Matthias Templ

References

Hron, K., Templ, M., Filzmoser, P. (2010) Imputation of missing values for compositional data using classical and robust methods Computational Statistics and Data Analysis, 54 (12), 3095-3107.

Templ, M., Hron, K., Filzmoser, P., Gardlo, A. (2016). Imputation of rounded zeros for high-dimensional compositional data. Chemometrics and Intelligent Laboratory Systems, 155, 183-190.

See Also

rdcm

Examples

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data(expenditures)
x <- expenditures
x[1,3] <- NA
xi <- impKNNa(x)$xImp
ced(expenditures, xi, ni = sum(is.na(x)))

Example output

Loading required package: robustbase
Loading required package: ggplot2
Loading required package: data.table
Loading required package: e1071
Loading required package: pls

Attaching package: 'pls'

The following object is masked from 'package:stats':

    loadings

sROC 0.1-2 loaded

Attaching package: 'robCompositions'

The following object is masked from 'package:robustbase':

    alcohol

[1] 0.03052465

robCompositions documentation built on Jan. 13, 2021, 10:07 p.m.