check_ss_ssdtc_alive_dm: Check non-missing last ALIVE status date in SS is before than...

In sdtmchecks: Data Quality Checks for Study Data Tabulation Model (SDTM) Datasets

Check non-missing last ALIVE status date in SS is before than death date in DM

Description

This check looks for non-missing SS.SSDTC when SS.SSORRES contains 'ALIVE' and Subject Status Date/Time of Assessments is greater then Start Date/Time of Disposition Event(SS.SSDTC > DS.DSSTDTC)

Usage

check_ss_ssdtc_alive_dm(SS, DM)

Arguments

SS	Subject Status SDTM dataset with variables USUBJID, SSDTC, SSORRES, SSTESTCD, VISIT
DM	Demographics SDTM dataset with variables USUBJID, DTHDTC

Value

boolean value if check failed or passed with 'msg' attribute if the test failed

Author(s)

Vira Vrakina

Examples

SS <- data.frame(
 USUBJID = 1:5,
 SSDTC = "2020-01-02",
 SSTESTCD = "SURVSTAT",
 SSORRES  = c("DEAD","DEAD","ALIVE","DEAD","ALIVE"),
 VISIT = "WEEK 4"
)


DM <- data.frame(
 USUBJID = 1:5,
 DTHDTC = "2020-01-03"
)

check_ss_ssdtc_alive_dm(SS, DM)

SS <- data.frame(
 USUBJID = 1:5,
 SSDTC = "2020-01-04",
 SSTESTCD = "SURVSTAT",
 SSORRES  = c("DEAD","DEAD","ALIVE","DEAD","ALIVE"),
 VISIT = "WEEK 4"
)

DM <- data.frame(
 USUBJID = 1:5,
 DTHDTC = c("2020-01-04", "2020-01-05", "2020-01-03", "2020-01-04", "2020-01-05")
)

check_ss_ssdtc_alive_dm(SS, DM)

sdtmchecks documentation built on Sept. 11, 2024, 9:34 p.m.