plotnetwork: Plot weighted transmission network

In seedy: Simulation of Evolutionary and Epidemiological Dynamics

Description

For a given weighted adjacency matrix, plots a directed network illustrating transmission probabilities.

Usage

plotnetwork(probmat, labels, arrlen = 0.15, scale = 1, ...)

Arguments

probmat	Transmission probability matrix. The [i,j]th element represents the probability that person i infected person j.
labels	Labels representing row and columns in the probability matrix.
arrlen	Length of arrow heads (see arrows).
scale	Scaling for colors according to probability values.
...	Additional arguments to be passed to plot.

Examples

data(outbreak)
K <- networkmat(outbreak$epidata[,1], outbreak$epidata[,4])
plotnetwork(K, labels=outbreak$epidata[,1])
		

seedy documentation built on May 29, 2017, 10:58 a.m.