Likelihood ratio test (LRT) for lavaan models fitted to multiple imputed data sets. Statistics for comparing nested models can be calculated by pooling the likelihood ratios across imputed data sets, as described by Meng & Rubin (1992), or by pooling the LRT statistics from each imputation, as described by Li, Meng, Raghunathan, & Rubin (1991).
lavTestLRT.mi(object, h1 = NULL, test = c("D3", "D2"), omit.imps = c("no.conv", "no.se"), asymptotic = FALSE, pool.robust = FALSE, ...)
An object of class
Additional arguments passed to
The Meng & Rubin (1992) method, also referred to as the
statistic, is only applicable when using a likelihood-based estimator.
Otherwise (e.g., DWLS for categorical outcomes), users are notified that
test was set to
test = "Mplus" implies
asymptotic = TRUE
(see Asparouhov & Muthen, 2010).
Note that unlike
only be used to compare a single pair of models, not a longer list of
models. To compare several nested models fitted to multiple imputations,
see examples on the
compareFit help page.
A vector containing the LRT statistic (either an
F or χ^2
statistic, depending on the
asymptotic argument), its degrees of
freedom (numerator and denominator, if
asymptotic = FALSE), its
p value, and 2 missing-data diagnostics: the relative invrease
in variance (RIV, or average for multiparameter tests: ARIV) and the
fraction missing information (FMI = ARIV / (1 + ARIV)). Robust statistics
will also include the average (across imputations) scaling factor and
(if relevant) shift parameter(s), unless
pool.robust = TRUE.
Terrence D. Jorgensen (University of Amsterdam; TJorgensen314@gmail.com)
Enders, C. K. (2010). Applied missing data analysis. New York, NY: Guilford.
Li, K.-H., Meng, X.-L., Raghunathan, T. E., & Rubin, D. B. (1991). Significance levels from repeated p-values with multiply-imputed data. Statistica Sinica, 1(1), 65–92. Retrieved from https://www.jstor.org/stable/24303994
Meng, X.-L., & Rubin, D. B. (1992). Performing likelihood ratio tests with multiply-imputed data sets. Biometrika, 79(1), 103–111. doi: 10.2307/2337151
Rubin, D. B. (1987). Multiple imputation for nonresponse in surveys. New York, NY: Wiley.
## Not run: ## impose missing data for example HSMiss <- HolzingerSwineford1939[ , c(paste("x", 1:9, sep = ""), "ageyr","agemo","school")] set.seed(12345) HSMiss$x5 <- ifelse(HSMiss$x5 <= quantile(HSMiss$x5, .3), NA, HSMiss$x5) age <- HSMiss$ageyr + HSMiss$agemo/12 HSMiss$x9 <- ifelse(age <= quantile(age, .3), NA, HSMiss$x9) ## impute missing data library(Amelia) set.seed(12345) HS.amelia <- amelia(HSMiss, m = 20, noms = "school", p2s = FALSE) imps <- HS.amelia$imputations ## specify CFA model from lavaan's ?cfa help page HS.model <- ' visual =~ x1 + b1*x2 + x3 textual =~ x4 + b2*x5 + x6 speed =~ x7 + b3*x8 + x9 ' fit1 <- cfa.mi(HS.model, data = imps, estimator = "mlm") fit0 <- cfa.mi(HS.model, data = imps, estimator = "mlm", orthogonal = TRUE) ## By default, use D3. ## Must request a chi-squared statistic to be robustified. lavTestLRT.mi(fit1, h1 = fit0, asymptotic = TRUE) ## Using D2, you can either robustify the pooled naive statistic ... lavTestLRT.mi(fit1, h1 = fit0, asymptotic = TRUE, test = "D2") ## ... or pool the robust chi-squared statistic lavTestLRT.mi(fit1, h1 = fit0, asymptotic = TRUE, test = "D2", pool.robust = TRUE) ## End(Not run)
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.