estimate: Estimate initial kinetic parameters
In smoke: Small Molecule Octet/BLI Kinetics Experiment
estimate R Documentation
Estimate initial kinetic parameters
Description
Estimate the initial kinetic parameters, kOn0 and kOff0, and save in the returned "Bli" object. These parameters can serve as the starting value in the next step, fitKinetics, to calculate the kinetics binding model of the small-molecule under investigation.
Usage
estimate(obj)
Arguments
obj
obj of "Bli" class
Value
S4 object of "Bli" class
Note
kOn0 and kOff0 can also be input manually with the setter functions, kOn0<- and kOff0<-.
Author(s)
Qingan Sun, Xiaojun Li, James C Sacchettini
Maintainer: Qingan Sun <quinsun@gmail.com>
References
\insertRefpzasmoke
Examples
bli1 <- alignLoad(bli, 180, 780)
bli2 <- doubleBlank(bli1)
bli3 <- baseline(bli2, 1080, 1260)
bli4 <- estimate(bli3)
smoke documentation built on May 29, 2024, 8:30 a.m.
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| estimate | R Documentation |
Estimate initial kinetic parameters
Description
Estimate the initial kinetic parameters, kOn0 and kOff0, and save in the returned "Bli" object. These parameters can serve as the starting value in the next step, fitKinetics, to calculate the kinetics binding model of the small-molecule under investigation.
Usage
estimate(obj)
Arguments
obj |
|
Value
S4 object of "Bli" class
Note
kOn0 and kOff0 can also be input manually with the setter functions, kOn0<- and kOff0<-.
Author(s)
Qingan Sun, Xiaojun Li, James C Sacchettini
Maintainer: Qingan Sun <quinsun@gmail.com>
References
\insertRefpzasmoke
Examples
bli1 <- alignLoad(bli, 180, 780)
bli2 <- doubleBlank(bli1)
bli3 <- baseline(bli2, 1080, 1260)
bli4 <- estimate(bli3)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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