evanno: Run Evanno Method on STRUCTURE Results
In strataG: Summaries and Population Structure Analyses of Genetic Data

Description Usage Arguments Value Author(s) References See Also Examples

Calculate first and second order rates of changes of LnPr(K) from STRUCTURE results based on Evanno et al. 2005.

1	evanno(sr, plot = TRUE)

`sr`	output from a call to `structure`.
`plot`	logical. Generate a plot of Evanno metrics?

a list with:

`df`	data.frame with Evanno log-likelihood metrics for each value of K.
`plots`	list of four ggplot objects for later plotting.

Eric Archer eric.archer@noaa.gov

Evanno, G., Regnaut, S., and J. Goudet. 2005. Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Molecular Ecology 14:2611-2620.

structure clumpp

## Not run: 
data(msats.g)

# Run STRUCTURE
sr <- structureRun(msats, k.range = 1:4, num.k.rep = 10)

# Calculate Evanno metrics
evno <- evanno(sr)
evno

## End(Not run)