heterozygosity: Heterozygosity
In strataG: Summaries and Population Structure Analyses of Genetic Data
Description
Usage
Arguments
Note
Author(s)
Examples
View source: R/heterozygosity.R
Description
Calculate observed and heterozygosity.
Usage
1
heterozygosity(g, by.strata = FALSE, type = c("expected", "observed"))
Arguments
g
a gtypes object.
by.strata
logical - return results by strata?
type
return expected or observed heterozygosity
Note
If g is a haploid object with sequences, the value for
expected heterozygosity (= haplotpyic diversity) will be returned.
Author(s)
Eric Archer eric.archer@noaa.gov
Examples
1
2
3
4
5
6
7
data(msats.g)
# Expected heterozygosity
heterozygosity(msats.g, type = "expected")
# Observed heterozygosity by strata
heterozygosity(msats.g, FALSE, "observed")
strataG documentation built on Feb. 28, 2020, 9:07 a.m.
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Description Usage Arguments Note Author(s) Examples
View source: R/heterozygosity.R
Description
Calculate observed and heterozygosity.
Usage
1 | heterozygosity(g, by.strata = FALSE, type = c("expected", "observed"))
|
Arguments
g |
a gtypes object. |
by.strata |
logical - return results by strata? |
type |
return |
Note
If g is a haploid object with sequences, the value for
expected heterozygosity (= haplotpyic diversity) will be returned.
Author(s)
Eric Archer eric.archer@noaa.gov
Examples
1 2 3 4 5 6 7 | data(msats.g)
# Expected heterozygosity
heterozygosity(msats.g, type = "expected")
# Observed heterozygosity by strata
heterozygosity(msats.g, FALSE, "observed")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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