postvar: Estimated multiplicative batch effect

Description Usage Arguments Value Warning Author(s) References See Also

Description

Estimated multiplicative batch effect

Usage

1
postvar(sum2, n, a, b)

Arguments

sum2

Batch sample variance.

n

A vector containing the sum of the rows of standardized gene expression data.

a

Value of aprior function applied to multiplicative batch effect.

b

Value of bprior function applied to multiplicative batch effect.

Value

Estimated multiplicative batch effect

Warning

This function is not called by the user directly.

Author(s)

WE Johnson

References

W. Johnson E., L. Chen, Rabinovic, and A. Adjusting batch effects in microarray expression data using Empirical Bayes methods. Biostatistics, 8(1):118-127, January2007. ISSN 1465-4644. doi: http://dx.doi.org/10.1093/biostatistics/kxj037.

See Also

ComBat,aprior,bprior


survJamda documentation built on May 1, 2019, 8:50 p.m.