promptSysBiolAlg: Generate A Skeletal Structure of Subclasses of sysBiolAlg

In sybil: Efficient Constrained Based Modelling

Description

Generates a skeletal structure of new subclasses of class sysBiolAlg, in particular for the constructor method initialize.

Usage

  promptSysBiolAlg(algorithm, prefix = "sysBiolAlg", sep = "_",
                   suffix = "R", fpath = ".", ...)

Arguments

algorithm	A single character string containing the name of the new algorithm.
prefix	A single character string containing a prefix for the new algorithm, see Details below. Default: "sysBiolAlg".
sep	A single character string containing a separator for prefix and algorithm. Default: "_".
suffix	A single character string containing a file name suffix. Default: "R".
fpath	A single character string containing a file path. Default: ....
...	Further arguments passed to file.

Details

The arguments prefix algorithm are stick together separated by sep (default: a single underscore "_") to get the new class name: prefix_algorithm. The filename will be: prefix_algorithmClass.R.

The class definition in the new file will extend class sysBiolAlg directly and will not add any slots. Additionally a skeletal structure for method initialize will be generated. In this method, the user should create all arguments to the initialize method described in the base class sysBiolAlg and put them all to callNextMethod. Or, alternatively, generate an instance of class optObj “by hand”.

Value

Returns NULL invisible.

Author(s)

Gabriel Gelius-Dietrich <[e-mail]>

Maintainer: Mayo Roettger <[e-mail]>

See Also

sysBiolAlg

sybil documentation built on May 31, 2021, 5:08 p.m.