Files in trialr

Clinical Trial Designs in 'rstan'

NEWS.md README.md R/spread_paths.R R/efftox_utility_density_plot.R R/stanmodels.R R/crm_fit.R R/peps2_process.R R/stan_efftox_demo.R R/dose_finding_fit.R R/nbg_fit.R R/EffTox.R R/stan_crm.R R/efftox_contour_plot.R R/ranBin2.R R/n_at_dose.R R/efftox_utility.R R/efftox_solve_p.R R/peps2_get_data.R R/augbin_2t_1a_fit.R R/crm_path_analysis.R R/careful_escalation.R R/eff_at_dose.R R/efftox_process.R R/crm_prior_beliefs.R R/trialr_simulate.R R/stan_augbin_demo.R R/stan_hierarchical_response_thall.R R/dose_finding_paths.R R/total_weight_at_dose.R R/dose_finding_path_node.R R/prob_success.R R/stan_peps2.R R/crm_params.R R/efftox_parameters_demo.R R/misc.R R/stan_efftox.R R/crm_process.R R/efftox_params.R R/efftox_priors.R R/tox_at_dose.R R/rlkjcorr.R R/crm_codified_dose_logistic.R R/parse_eff_tox_dose_finding_outcomes.R R/stan_nbg.R R/efftox_get_tox.R R/efftox_dtps_to_dataframe.R R/crm_dtps.R R/efftox_fit.R R/stan_augbin.R R/augbin_fit.R R/efftox_simulate.R R/trialr-package.R R/efftox_dtps.R R/get_efftox_priors.R R/binary_prob_success.R R/prior_predictive_augbin_2t_1a.R R/parse_dose_finding_outcomes.R R/efftox_parse_outcomes.R R/weights_at_dose.R R/efftox_analysis_to_df.R R/df_parse_outcomes.R R/efftox_path_analysis.R R/prob_tox_exceeds.R R/efftox_superiority.R inst/doc/A400-EffTox.R inst/doc/A260-TITE-CRM.Rmd inst/doc/A500-HierarchicalBayesianResponse.R inst/doc/A210-CRM-visualisation.Rmd inst/doc/A220-CRM-pathways.Rmd inst/doc/A300-NeuenschwanderBransonGsponer.Rmd inst/doc/A200-CRM.Rmd inst/doc/A250-LevyCaseStudy.Rmd inst/doc/A600-BEBOP.Rmd inst/doc/A220-CRM-pathways.R inst/doc/A600-BEBOP.R inst/doc/A300-NeuenschwanderBransonGsponer.R inst/doc/A260-TITE-CRM.R inst/doc/A250-LevyCaseStudy.R inst/doc/A210-CRM-visualisation.R inst/doc/A400-EffTox.Rmd inst/doc/A200-CRM.R inst/doc/A500-HierarchicalBayesianResponse.Rmd tests/testthat.R tests/testthat/test_parse_dose_finding_outcomes.R tests/testthat/test_efftox_utility_density_plot.R tests/testthat/test_efftox_dtps_to_dataframe.R tests/testthat/test_crm_codified_dose_logistic.R tests/testthat/test_df_parse_outcomes.R tests/testthat/test_stan_augbin.R tests/testthat/test_hierarchical.R tests/testthat/test_peps2.R tests/testthat/test_misc.R tests/testthat/test_careful_escalation.R tests/testthat/test_spread_paths.R tests/testthat/test_crm_dtps.R tests/testthat/test_stan_efftox.R tests/testthat/test_ranBin2.R tests/testthat/test_efftox.R tests/testthat/test_parse_eff_tox_dose_finding_outcomes.R tests/testthat/test_efftox_parse_outcomes.R tests/testthat/test_get_efftox_priors.R tests/testthat/test_rlkjcorr.R tests/testthat/test_stan_crm.R tests/testthat/test_efftox_dtps.R tests/testthat/test_stan_nbg.R vignettes/A260-TITE-CRM.Rmd vignettes/A210-CRM-visualisation.Rmd vignettes/A220-CRM-pathways.Rmd vignettes/A300-NeuenschwanderBransonGsponer.Rmd vignettes/A200-CRM.Rmd vignettes/A250-LevyCaseStudy.Rmd vignettes/A600-BEBOP.Rmd vignettes/A400-EffTox.Rmd vignettes/A500-HierarchicalBayesianResponse.Rmd man/prior_predictive_augbin_2t_1a.Rd man/efftox_priors.Rd man/print.augbin_fit.Rd man/total_weight_at_dose.Rd man/stan_augbin_demo.Rd man/efftox_params-class.Rd man/crm_fit-class.Rd man/df_parse_outcomes.Rd man/efftox_solve_p.Rd man/stan_peps2.Rd man/ranBin2.Rd man/as.data.frame.crm_fit.Rd man/as.mcmc.list.efftox_fit.Rd man/predict.augbin_2t_1a_fit.Rd man/trialr_simulate.Rd man/parse_dose_finding_outcomes.Rd man/rlkjcorr.Rd man/parse_eff_tox_dose_finding_outcomes.Rd man/peps2_get_data.Rd man/summary.crm_fit.Rd man/crm_params-class.Rd man/efftox_fit-class.Rd man/prob_tox_exceeds.Rd man/peps2_process.Rd man/prob_success.Rd man/print.crm_fit.Rd man/eff_at_dose.Rd man/crm_process.Rd man/crm_prior_beliefs.Rd man/efftox_contour_plot.Rd man/weights_at_dose.Rd man/efftox_utility.Rd man/crm_dtps.Rd man/efftox_utility_density_plot.Rd man/efftox_superiority.Rd man/augbin_2t_1a_fit.Rd man/spread_paths.Rd man/get_efftox_priors.Rd man/as_tibble.dose_finding_paths.Rd man/n_at_dose.Rd man/print.nbg_fit.Rd man/closest_to_target.Rd man/efftox_dtps_to_dataframe.Rd man/efftox_dtps.Rd man/efftox_get_tox.Rd man/dose_finding_fit-class.Rd man/efftox_parameters_demo.Rd man/plot.crm_fit.Rd man/stan_nbg.Rd man/efftox_simulate.Rd man/as.data.frame.efftox_fit.Rd man/as.mcmc.list.crm_fit.Rd man/stan_efftox.Rd man/careful_escalation.Rd man/stan_efftox_demo.Rd man/efftox_parse_outcomes.Rd man/stan_hierarchical_response_thall.Rd man/summary.efftox_fit.Rd man/efftox_analysis_to_df.Rd man/stan_crm.Rd man/stan_augbin.Rd man/tox_at_dose.Rd man/dose_finding_path_node-class.Rd man/efftox_process.Rd man/trialr-package.Rd man/augbin_fit.Rd man/plot.efftox_fit.Rd man/crm_codified_dose_logistic.Rd man/crm_path_analysis.Rd man/efftox_path_analysis.Rd man/as_tibble.augbin_2t_1a_fit.Rd man/print.efftox_fit.Rd man/binary_prob_success.Rd