Files in yCrypticRNAs
Cryptic Transcription Analysis in Yeast
inst
inst/extdata
inst/extdata/mut_rep2.bam
inst/extdata/mut_rep1.bam
inst/extdata/wt_rep2.bam
inst/extdata/wt_rep1.bam
inst/doc
inst/doc/yCrypticRNAs.pdf
inst/doc/yCrypticRNAs.R
inst/doc/yCrypticRNAs.Rmd
tests
tests/yCrypticRNAs_tests.R
tests/testthat.R
tests/testthat
tests/testthat/test-string.R
src
src/my_coverage.h
src/bedFile.h
src/bedFile.cpp
src/lineFileUtilities.h
src/BlockedIntervals.cpp
src/my_coverage.cpp
src/my_coverageMain.cpp
src/RcppExports.cpp
src/BlockedIntervals.h
NAMESPACE
data
data/annotations.rda
data/rna_seq_signals.rda
data/yer109c.rda
data/introns.rda
R
R/utils.R
R/coverageDataSet.R
R/datasets-documentations.R
R/cryptic_transcripts_methods.R
R/annotationSet.R
R/RcppExports.R
R/yCrypticRNAs.R
R/initiation_points_methods.R
vignettes
vignettes/yCrypticRNAs.Rmd
MD5
build
build/vignette.rds
DESCRIPTION
man
man/rna_seq_signals.Rd
man/initiation_sites.Rd
man/introns.Rd
man/enrichment_score.Rd
man/genome_wide_scores.Rd
man/bam_to_reads.Rd
man/as.annotationsSet.Rd
man/yer109c.Rd
man/coverage.Rd
man/yCrypticRNAs.Rd
man/annotations.Rd
man/coverageDataSet.Rd
man/gene_coverage.Rd
man/zscore_score.Rd
man/annotationsSet.Rd
man/ratio_score.Rd
