as.annotationsSet: Convert a data.table into a geneAnnotation object.

In yCrypticRNAs: Cryptic Transcription Analysis in Yeast

Description

Create a geneAnnotation object containing the informations on chromosomes, start and end positions, strand, score and name of genes.

Usage

as.annotationsSet(data)

Arguments

data	A data.table with 6 columns corresponding to the genes' chromosome, start posittion, end position, gene name, gene score and gene strand.

Value

An object of class geneAnnotation with the following components:

chromosome	Gene chromosome.
start	Gene transcription start site.
end	Gene transcription termination site.
name	Gene name.
score	Gene score.
strand	Gene strand.

Examples

data(annotations)
as.annotationsSet(annotations)

yCrypticRNAs documentation built on May 29, 2017, 5:49 p.m.