KEGGGraphics-class: class 'KEGGGraphics'

In Accio/KEGGgraph: KEGGgraph: A graph approach to KEGG PATHWAY in R and Bioconductor

class 'KEGGGraphics'

Description

A class to represent 'graphics' element in KGML files

Objects from the Class

This method is mainly used to extract visualization information from KGML files.

Objects can be created by calling parseGraphics

Slots

name:

Object of class "character" graphics name

x:

Object of class "integer" x coordinate in KEGG figure

y:

Object of class "integer" y coordinate in KEGG figure

type:

Object of class "character" graphics type (shape)

width:

Object of class "integer" witdh of the symbol

height:

Object of class "integer" height of the symbol

fgcolor:

Object of class "character" foreground color

bgcolor:

Object of class "character" background color

Author(s)

Jitao David Zhang mailto:[e-mail]

References

KGML Manual https://www.genome.jp/kegg/docs/xml/

See Also

parseGraphics

Examples

showClass("KEGGGraphics")

Accio/KEGGgraph documentation built on Jan. 13, 2023, 1:03 p.m.