getPathwayInfo-methods: Get KEGG pathway info
In Accio/KEGGgraph: KEGGgraph: A graph approach to KEGG PATHWAY in R and Bioconductor
getPathwayInfo-methods R Documentation
Get KEGG pathway info
Description
KEGG stores additional information of the pathways in their KGML
files, which can be extracted by this function.
The method returns the attributes of the pathway including its full
title, short name, organism, image file link (which can be downloaded
from KEGG website) and web link.
Methods
- object = "KEGGPathway"
An object of
KEGGPathway-class
Examples
sfile <- system.file("extdata/hsa04010.xml",package="KEGGgraph")
pathway <- parseKGML(sfile)
getPathwayInfo(pathway)
Accio/KEGGgraph documentation built on Jan. 13, 2023, 1:03 p.m.
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| getPathwayInfo-methods | R Documentation |
Get KEGG pathway info
Description
KEGG stores additional information of the pathways in their KGML files, which can be extracted by this function.
The method returns the attributes of the pathway including its full title, short name, organism, image file link (which can be downloaded from KEGG website) and web link.
Methods
- object = "KEGGPathway"
An object of
KEGGPathway-class
Examples
sfile <- system.file("extdata/hsa04010.xml",package="KEGGgraph")
pathway <- parseKGML(sfile)
getPathwayInfo(pathway)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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