parseKGML: KGML file parser
In Accio/KEGGgraph: KEGGgraph: A graph approach to KEGG PATHWAY in R and Bioconductor
parseKGML R Documentation
KGML file parser
Description
The function parses KGML files according to the KGML XML documentation.
Usage
parseKGML(file)
Arguments
file
Name of KGML file
Details
The function parses KGML file (depending on XML package).
Value
An object of KEGGPathway-class.
Author(s)
Jitao David Zhang mailto:jitao_david.zhang@roche.com
References
KGML Manual https://www.genome.jp/kegg/docs/xml/
See Also
parseEntry, parseRelation,
parseReaction, KEGGPathway-class,
Examples
sfile <- system.file("extdata/hsa04010.xml",package="KEGGgraph")
kegg.pathway <- parseKGML(sfile)
kegg.pathway
Accio/KEGGgraph documentation built on Jan. 13, 2023, 1:03 p.m.
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| parseKGML | R Documentation |
KGML file parser
Description
The function parses KGML files according to the KGML XML documentation.
Usage
parseKGML(file)
Arguments
file |
Name of KGML file |
Details
The function parses KGML file (depending on XML package).
Value
An object of KEGGPathway-class.
Author(s)
Jitao David Zhang mailto:jitao_david.zhang@roche.com
References
KGML Manual https://www.genome.jp/kegg/docs/xml/
See Also
parseEntry, parseRelation,
parseReaction, KEGGPathway-class,
Examples
sfile <- system.file("extdata/hsa04010.xml",package="KEGGgraph")
kegg.pathway <- parseKGML(sfile)
kegg.pathway
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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