getKEGGID-methods: Get KEGG ID
In Accio/KEGGgraph: KEGGgraph: A graph approach to KEGG PATHWAY in R and Bioconductor
getKEGGID-methods R Documentation
Get KEGG ID
Description
Get KEGGID from a KEGGNode-class object.
The KEGGNode-class can be either another pathway (KEGGID
in the form like 'hsa\d*'), KEGG Gene ('hsa:\d*') or compound
('cpd:C\d*'). In case of the KEGG Gene ID, the organism prefix is
removed when the value is returned.
Methods
- object = "KEGGNode"
An object of KEGGNode-class
Examples
wntfile <- system.file("extdata/hsa04310.xml",package="KEGGgraph")
wnt <- parseKGML(wntfile)
nodes <- nodes(wnt)
getKEGGID(nodes[[1]])
getKEGGID(nodes[[26]])
Accio/KEGGgraph documentation built on Jan. 13, 2023, 1:03 p.m.
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| getKEGGID-methods | R Documentation |
Get KEGG ID
Description
Get KEGGID from a KEGGNode-class object.
The KEGGNode-class can be either another pathway (KEGGID
in the form like 'hsa\d*'), KEGG Gene ('hsa:\d*') or compound
('cpd:C\d*'). In case of the KEGG Gene ID, the organism prefix is
removed when the value is returned.
Methods
- object = "KEGGNode"
An object of
KEGGNode-class
Examples
wntfile <- system.file("extdata/hsa04310.xml",package="KEGGgraph")
wnt <- parseKGML(wntfile)
nodes <- nodes(wnt)
getKEGGID(nodes[[1]])
getKEGGID(nodes[[26]])
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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