PlotGeneWeight: Plot gene weigth across selected samples
In Albluca/rRoma: An r implementation of ROMA
Description
Plot gene weigth across selected samples
Usage
1
2
PlotGeneWeight(RomaData, PlotGenes = 40, ExpressionMatrix = NULL,
LogExpression = TRUE, Selected = NULL, PlotWeigthSign = FALSE)
Arguments
RomaData
list, the analysis returned by rRoma
PlotGenes
scalar, numeric. The number of genes to plot
ExpressionMatrix
matrix, numeric. The expression matrix used to produce gene expression boxplot. If NULL (default), no gene expression information is reported
LogExpression
boolean, should gene expression be logtransformed?
Selected
vector, integer. The position of the genesets to plot
PlotWeigthSign
boolean, should the sign of the genes weigth be used to color the plots?
Albluca/rRoma documentation built on May 5, 2019, 1:35 p.m.
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Description
Plot gene weigth across selected samples
Usage
1 2 | PlotGeneWeight(RomaData, PlotGenes = 40, ExpressionMatrix = NULL,
LogExpression = TRUE, Selected = NULL, PlotWeigthSign = FALSE)
|
Arguments
RomaData |
list, the analysis returned by rRoma |
PlotGenes |
scalar, numeric. The number of genes to plot |
ExpressionMatrix |
matrix, numeric. The expression matrix used to produce gene expression boxplot. If NULL (default), no gene expression information is reported |
LogExpression |
boolean, should gene expression be logtransformed? |
Selected |
vector, integer. The position of the genesets to plot |
PlotWeigthSign |
boolean, should the sign of the genes weigth be used to color the plots? |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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