Description Usage Arguments Details Value See Also Examples
Read Feature Extraction's txt files.
1 2 3 |
targets |
Feature Extraction's files. TXT format files only. |
path |
filepath, where FE-files are stored. Default: getwd(). |
format |
which format your FE-files have? Default: |
collect |
what the data signals you want to process? Default: |
macolors |
read two-color (2) or one-color (1) microarray. |
Collecting data from the format "compact"
can be taken on the processed signals
("processed"
), raw data ("mean"
or "median"
) or LogRatio ("LogRatio"
).
At the same time, if format selected as "full"
you may collect normalized data ("DyeNorm"
).
Targets object must be class data.frame
, and have two required column name
(eg.: "array1", "array2") and filenames
(eg. "2802860_12158125.txt").
Read Feature Extraction's files.
1 2 | # targets <- read.table("targets.txt", header = TRUE, stringsAsFactors = FALSE)
# MyArrays <- readAgilent(targets, collect = "median")
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