Description Usage Arguments Value
View source: R/filter_rna_h5.R
Subset a h5_list object based on a set of observations.
1 2 3 4 5 6 | subset_h5_list_by_observations(
h5_list,
match_values,
match_target = "barcodes",
sparse_matrices = "matrix"
)
|
h5_list |
a list object generated by running rhdf5::h5dump() on a 10x HDF5 file. |
match_values |
a vector of values to use for filtering |
match_target |
a character object specifying which values to use for filtering in the h5_list. If "barcodes", uses matrix/barcodes; Otherwise, looks in matrix/observations for matching values |
sparse_matrices |
a character vector specifying which list objects to treat as sparse matrices. If these aren't currently dgCMatrices, they will be converted by h5_list_convert_to_dgCMatrix for filtering. |
a list object
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