get.genes.in.data: Filter for only those genes in the data.
In Anderson-Lab/ComplementaryDomainPrioritization: ComplementaryDomainPrioritization and Filtering
Description
Usage
Arguments
Value
Examples
Description
Returns a corrected gene ID vector
Usage
1
get.genes.in.data(gene.ids, gene.data)
Arguments
gene.ids
A vector of Entrez Gene IDs
gene.data
The gene data loaded with the helper functions.
Value
a vector of Gene IDs
Examples
1
2
3
4
5
download.example.data()
Cattaneo.rna = load.gene.data("Cattaneo_array.csv",5)
webg.pathways = load.WebGestalt("Marra_0_kegg_protein_enrichment.tsv",'Kegg')
gene.ids = get.genes.kegg(webg.pathways)
genes.in.data = get.genes.in.data(gene.ids,Cattaneo.rna$data)
Anderson-Lab/ComplementaryDomainPrioritization documentation built on May 5, 2019, 5:59 a.m.
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Description Usage Arguments Value Examples
Description
Returns a corrected gene ID vector
Usage
1 | get.genes.in.data(gene.ids, gene.data)
|
Arguments
gene.ids |
A vector of Entrez Gene IDs |
gene.data |
The gene data loaded with the helper functions. |
Value
a vector of Gene IDs
Examples
1 2 3 4 5 | download.example.data()
Cattaneo.rna = load.gene.data("Cattaneo_array.csv",5)
webg.pathways = load.WebGestalt("Marra_0_kegg_protein_enrichment.tsv",'Kegg')
gene.ids = get.genes.kegg(webg.pathways)
genes.in.data = get.genes.in.data(gene.ids,Cattaneo.rna$data)
|
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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