Files in AndySouth/rtsetse
simulating tsetse fly populations
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
NAMESPACE
R/datasets.r
R/rtAgeing.r
R/rtAgeingGrid.r
R/rtCalcPupaPerSexAge.r
R/rtControlGrid.r
R/rtCreateGrid.r
R/rtCreateRecord.r
R/rtDensityDependence.r
R/rtGetFromGrid.r
R/rtGetFromRecord.r
R/rtLarvalDeposition.r
R/rtLarvalDepositionGrid.r
R/rtMortality.r
R/rtMortalityGrid.r
R/rtMortalityStableSeek.r
R/rtMove.r
R/rtMoveIsland.r
R/rtMoveReflect.r
R/rtMoveReflectNoGo.r
R/rtMoveReflectNoGoVeg.R
R/rtMoveReflectNoGoVegBoundary.r
R/rtPlotAgeStructure.r
R/rtPlotMapPop.r
R/rtPlotMapVeg.r
R/rtPlotMeanAge.r
R/rtPlotMeanAgeGrid.r
R/rtPlotMortRatesByAge.r
R/rtPlotPop.r
R/rtPlotPopAndPupae.r
R/rtPlotPopGrid.r
R/rtPupalAgeing.r
R/rtPupalEmergence.r
R/rtPupalEmergenceGrid.r
R/rtPupalMortality.r
R/rtPupalMortalityGrid.r
R/rtReadMapVeg.r
R/rtReportPhase2.r
R/rtSetAgeStructure.r
R/rtSetDepositionRatesByAge.r
R/rtSetDepositionRatesByAgeDI.r
R/rtSetGridFromVeg.r
R/rtSetMortRatesByAge.r
R/rtSetVegDifGrids.r
R/rtSetVegMoveGrids.r
R/rtWriteResults.R
R/rt_UI.r
R/rt_runAspatial.r
R/rt_runGrid.r
R/rt_runGridTestSpread.r
R/rtsetse.r
README.md
data/aRecord.rda
inst/CITATION
inst/extdata/vegBurkinaFasoMouhounTirados0_5km.csv
inst/extdata/vegBurkinaFasoMouhounTirados0_5km.txt
inst/extdata/vegCategoriesDefault.csv
inst/extdata/vegGuineaBoffaCourtinVale0_5km.csv
inst/extdata/vegGuineaBoffaCourtinVale0_5km.txt
inst/extdata/vegHalfSavannahHalfGrass50x50.csv
inst/extdata/vegHalfSavannahHalfGrass50x50.txt
inst/extdata/vegIvoryCoastBononCourtinTorr0_5km.txt
inst/extdata/vegMalawiRumphiVale1km.txt
inst/extdata/vegTanzaniaSerengetiTorr1km.csv
inst/extdata/vegTanzaniaSerengetiTorr1km.txt
inst/extdata/vegUgandaAruaRiverineTorr1km.csv
inst/extdata/vegUgandaAruaRiverineTorr1km.txt
inst/extdata/vegUgandaSETorr1km.txt
inst/extdata/vegZimbabweKaribaManaVale3km.txt
inst/extdata/veg_Example2x3.csv
inst/extdata/veg_Example2x3.txt
inst/extdata/veg_Example4x5.csv
inst/extdata/veg_Example4x5.txt
inst/rmarkdown/rtReportPhase2.Rmd
inst/shiny/shinytsetse.zip
inst/shiny/shinytsetse/about.md
inst/shiny/shinytsetse/exampleCCmap10x5.txt
inst/shiny/shinytsetse/exampleCCmap4x4.txt
inst/shiny/shinytsetse/exampleCCmap4x5.csv
inst/shiny/shinytsetse/exampleCCmap4x5.txt
inst/shiny/shinytsetse/mapCC50x50numeric.txt
inst/shiny/shinytsetse/rsconnect/shinyapps.io/andysouth/shinytsetse.dcf
inst/shiny/shinytsetse/rtReportPhase2fromShinytse7.Rmd
inst/shiny/shinytsetse/server.R
inst/shiny/shinytsetse/ui.r
inst/shiny/shinytsetse/www/bootstrap.min.css
inst/shiny/shinytsetse/www/helpfiles/helpLoadVegetation.html
inst/shiny/shinytsetse/www/helpfiles/rtsetse-workflow-copy.pdf
inst/shiny/shinytsetse/www/helpfiles/vegetation.png
man/aRecord.Rd
man/rtAgeing.Rd
man/rtAgeingGrid.Rd
man/rtCalcPupaPerSexAge.Rd
man/rtControlGrid.Rd
man/rtCreateGrid.Rd
man/rtCreateRecord.Rd
man/rtDDTest.Rd
man/rtDensityDependence.Rd
man/rtGetFromGrid.Rd
man/rtGetFromRecord.Rd
man/rtLarvalDeposition.Rd
man/rtLarvalDepositionGrid.Rd
man/rtMortality.Rd
man/rtMortalityGrid.Rd
man/rtMortalityStableSeek.Rd
man/rtMove.Rd
man/rtMoveIsland.Rd
man/rtMoveReflect.Rd
man/rtMoveReflectNoGo.Rd
man/rtMoveReflectNoGoVeg.Rd
man/rtMoveReflectNoGoVegBoundary.Rd
man/rtPlotAgeStructure.Rd
man/rtPlotMapPop.Rd
man/rtPlotMapVeg.Rd
man/rtPlotMeanAge.Rd
man/rtPlotMeanAgeGrid.Rd
man/rtPlotMortRatesByAge.Rd
man/rtPlotPop.Rd
man/rtPlotPopAndPupae.Rd
man/rtPlotPopGrid.Rd
man/rtPupalAgeing.Rd
man/rtPupalEmergence.Rd
man/rtPupalEmergenceGrid.Rd
man/rtPupalMortality.Rd
man/rtPupalMortalityGrid.Rd
man/rtReadMapVeg.Rd
man/rtReportPhase2.Rd
man/rtSetAgeStructure.Rd
man/rtSetDepositionRatesByAge.Rd
man/rtSetDepositionRatesByAgeDI.Rd
man/rtSetGridFromVeg.Rd
man/rtSetMortRatesByAge.Rd
man/rtSetVegDifGrids.Rd
man/rtSetVegMoveGrids.Rd
man/rt_runAspatial.Rd
man/rt_runGrid.Rd
man/rt_runGridTestSpread.Rd
man/rtsetse.Rd
man/shiftGridIslandE.Rd
man/shiftGridIslandN.Rd
man/shiftGridIslandS.Rd
man/shiftGridIslandW.Rd
man/shiftGridReflectE.Rd
man/shiftGridReflectN.Rd
man/shiftGridReflectS.Rd
man/shiftGridReflectW.Rd
rtsetse.Rproj
tests/testthat.R
tests/testthat/testControl.r
tests/testthat/testGetFromRecord.r
tests/testthat/testMortality.r
tests/testthat/testMove.r
vignettes/helpLoadVegetation.html
vignettes/rtsetse-workflow.R
vignettes/rtsetse-workflow.Rmd
vignettes/rtsetse-workflow.pdf
vignettes/rtsetseUI_1seek.png
vignettes/rtsetseUI_1seek_mort_by_age.png
vignettes/rtsetseUI_2aspatial.png
vignettes/rtsetseUI_3map_start.png
vignettes/rtsetseUI_3map_stored.png
vignettes/rtsetseUI_4run_grid_large.png
vignettes/rtsetseUI_4run_grid_small.png
vignettes/rtsetseUI_5control.png
vignettes/rtsetseUI_about.png
vignettes/vegetation.png
vignettes/vignette-eg1-sav-grass.R
vignettes/vignette-eg1-sav-grass.Rmd
vignettes/vignette-eg1-sav-grass.pdf
vignettes/vignette-movement.R
vignettes/vignette-movement.Rmd
vignettes/vignette-movement.pdf
