chol_pseudo_time: chol_pseudo_time
In AnnaLaddach/TrajectoryGeometry: This Package Discovers Directionality in Time and Pseudo-times Series of Gene Expression Patterns
chol_pseudo_time R Documentation
chol_pseudo_time
Description
A vector of pseudotime values for a trajectory describing the
development of cholangiocytes from hepatoblasts.
Pseudotime values have been inferred using the SlingShot
package. The vector is named according to cell ID.
Usage
chol_pseudo_time
Format
A vector
A vector of pseudotime values for a trajectory describing the
development of cholangiocytes from hepatoblasts.
Pseudotime values have been inferred using the SlingShot
package. The vector is named according to cell ID.
Source
Single-cell data has been obtained from GEO (GSE90047) and the script
used for upstream processing is available at
https://github.com/AnnaLaddach/TrajectoryGeometryData
AnnaLaddach/TrajectoryGeometry documentation built on Oct. 18, 2024, 5:57 p.m.
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| chol_pseudo_time | R Documentation |
chol_pseudo_time
Description
A vector of pseudotime values for a trajectory describing the development of cholangiocytes from hepatoblasts. Pseudotime values have been inferred using the SlingShot package. The vector is named according to cell ID.
Usage
chol_pseudo_time
Format
A vector
A vector of pseudotime values for a trajectory describing the development of cholangiocytes from hepatoblasts. Pseudotime values have been inferred using the SlingShot package. The vector is named according to cell ID.
Source
Single-cell data has been obtained from GEO (GSE90047) and the script used for upstream processing is available at https://github.com/AnnaLaddach/TrajectoryGeometryData
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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