hep_pseudo_time: hep_pseudo_time

hep_pseudo_timeR Documentation

hep_pseudo_time

Description

A vector of pseudotime values for a trajectory describing the development of hepatocytes from hepatoblasts. Pseudotime values have been inferred using the SlingShot package. The vector is named according to cell ID.

Usage

hep_pseudo_time

Format

A vector

A vector of pseudotime values for a trajectory describing the development of hepatocytes from hepatoblasts. Pseudotime values have been inferred using the SlingShot package. The vector is named according to cell ID.

Source

Single-cell data has been obtained from GEO (GSE90047) and the script used for upstream processing is available at https://github.com/AnnaLaddach/TrajectoryGeometryData


AnnaLaddach/TrajectoryGeometry documentation built on Oct. 14, 2022, 10:27 a.m.