varianceInDirection: Portion of cell variance in a given direction

In AnnaLaddach/TrajectoryGeometry: This Package Discovers Directionality in Time and Pseudo-times Series of Gene Expression Patterns

Portion of cell variance in a given direction

Description

This function takes a direction and a set of cells epressed in PCs and determines the fraction of total variance in the given direction.

Usage

varianceInDirection(direction, cells)

Arguments

direction	- a numeric giving the direction expressed in PCs
cells	- a set of cells given as a matrix where each row is a cell and each column is a PC. This must have at least as many PCs as the direction

Value

The fraction of total variance (across that many PCs) in the given direction.

AnnaLaddach/TrajectoryGeometry documentation built on Feb. 23, 2024, 2:24 p.m.