BIMSBbioinfo/ciRcus: Annotation, analysis and visualization of circRNA data

A package for annotation, analysis and visualization of circRNA data. Users can annotate their circRNA candidates with host genes, gene featrues they are spliced from, and discriminate between known and yet unknown splice junctions. Circular-to-linear ratios of circRNAs can be calculated, and a number of descriptive plots easily generated.

Getting started

Package details

AuthorPetar Glazar [aut, cre], Vedran Franke [aut, cre], Marcel Schilling [aut, cre]
Bioconductor views Annotation HighThroughputSequencing Visualization
MaintainerPetar Glazar <[email protected]>, Vedran Franke <[email protected]>, Marcel Schilling <[email protected]>
LicenseArtistic-2.0
Version0.1.6
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("BIMSBbioinfo/ciRcus")
BIMSBbioinfo/ciRcus documentation built on Dec. 7, 2018, 1:07 p.m.