API for BIMSBbioinfo/ciRcus
Annotation, analysis and visualization of circRNA data

Global functions
AnnotateRanges Man page Source code
MungeColumn Man page Source code
ProcessLinear Man page Source code
annotPie Man page
annotPie,RangedSummarizedExperiment-method Man page
annotateCircs Man page
annotateCircs,RangedSummarizedExperiment-method Man page
annotateFlanks Man page Source code
annotateHostGenes Man page Source code
annotateJunctions Man page Source code
bedTracks Man page
bedTracks,RangedSummarizedExperiment-method Man page
ciRcus Man page
ciRcus-package Man page
circLinRatio Man page
circLinRatio,RangedSummarizedExperiment-method Man page
ensg2name Man page Source code
getIDs Man page Source code
getStudiesList Man page Source code
gtf2sqlite Man page Source code
histogram Man page
histogram,RangedSummarizedExperiment-method Man page
loadAnnotation Man page
loadAnnotation,TxDb-method Man page
loadAnnotation,character-method Man page
onLoad Source code
qualFilter Man page Source code
readCircs Man page Source code
resTable Man page
resTable,RangedSummarizedExperiment-method Man page
summarizeCircs Man page
summarizeCircs,character-method Man page
summarizeCircs,data.frame-method Man page
testCoordinateIndexing Man page Source code
uniqReadsQC Man page
uniqReadsQC,RangedSummarizedExperiment-method Man page
writeBedTracks Man page
writeBedTracks,GRangesList-method Man page
writeBedTracks,RangedSummarizedExperiment-method Man page
BIMSBbioinfo/ciRcus documentation built on Dec. 7, 2018, 1:07 p.m.