API for BIMSBbioinfo/reg2gene
Predicting the target genes for regulatory elements

Global functions
GRReg1_toy Man page
GRReg2_toy Man page
ModellingTest Man page
annotateInteractionsToGenes Man page Source code
annotateToPromoter Man page Source code
assocTable Source code
assocTable2 Man page Source code
associateReg2Gene Man page Source code
associateReg2GeneChunks Source code
benchPlotHelp Man page Source code
benchmarkInteractions Man page Source code
benchmarkInteractionssimple Man page Source code
bwToGeneExp Man page Source code
checkGrlStr Source code
checkGrlStrMeta Source code
compareModelStat Man page Source code
compareReg2Traits Man page Source code
confusionMatrix Man page Source code
corMat Man page Source code
corResample Man page Source code
createIntTrack Man page Source code
dcorMat Man page Source code
dcorResample Man page Source code
detectGeneEnhPresence Man page Source code
estimateGammaPval Man page Source code
exonExpressionStrandAdjusted Man page Source code
extractInfo Man page Source code
filterPreBenchGIsimple Man page Source code
forceByname Man page Source code
getGeneEnhScoresDF Man page Source code
getStatistics Man page Source code
getTSS Man page Source code
gettingGeneInfoEnsembl Man page Source code
glmnetResample Man page Source code
grReorg Man page Source code
grlist2GI Man page Source code
grlist2gr Man page Source code
makeIndexTable Man page Source code
manyZeros Man page Source code
metaInteractions Man page Source code
normalizeScores Man page Source code
perGeneModelling Man page Source code
plotGEEA Man page Source code
plotInteractions Man page Source code
quantifyGeneExpression Man page Source code
qvaluCal Man page Source code
reg2gene Man page Man page Source code
reg2gene-package Man page
reg2trait Man page Source code
regActivity Man page Source code
regActivityAroundTSS Man page Source code
rfResample Man page Source code
scoresAsMcols Man page Source code
selectEP Man page Source code
selectGeneF Man page Source code
selectRegR Man page Source code
setColors Man page Source code
stepwise.complete.cases Man page Source code
voteInteractions Man page Source code
votedEP Man page Source code
zeroVar Man page Source code
BIMSBbioinfo/reg2gene documentation built on May 10, 2018, 8:02 a.m.