quantifyGeneExpression: Function that quantifies gene expression based on...
In BIMSBbioinfo/reg2gene: Predicting the target genes for regulatory elements
Description
Usage
Arguments
Value
Author(s)
Description
Function that calculates per gene expression based on exon expression results
sum across exons (mean value across exon*exon width)/
gene_length(sum_of_all_exon_lengths)
Usage
1
quantifyGeneExpression(expressionPerGene, exonsForGene)
Arguments
expressionPerGene
GRanges object with exon coordinates and
metadata info about corresponding genes and quantifed exon expression
Value
Granges object of genes with metadata which corresponds to quantified
gene expression
Author(s)
Inga Patarcic
BIMSBbioinfo/reg2gene documentation built on May 3, 2019, 6:42 p.m.
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Description Usage Arguments Value Author(s)
Description
Function that calculates per gene expression based on exon expression results sum across exons (mean value across exon*exon width)/ gene_length(sum_of_all_exon_lengths)
Usage
1 | quantifyGeneExpression(expressionPerGene, exonsForGene)
|
Arguments
expressionPerGene |
GRanges object with exon coordinates and metadata info about corresponding genes and quantifed exon expression |
Value
Granges object of genes with metadata which corresponds to quantified gene expression
Author(s)
Inga Patarcic
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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