perGeneModelling: Function returns output of called modelling procedure...
In BIMSBbioinfo/reg2gene: Predicting the target genes for regulatory elements
Description
Usage
Arguments
Author(s)
Description
It extracts gene-enhancer scores from metadata of GRanges object and filters
NA values using stepwise.complete.cases() embedded in getGeneEnhScoresDF()
Performs FILTERING: drop gene and NA is returned due to low or zero variation
in gene expression or when no enhancers are remained after
stepwise.complete.cases()
Usage
1
perGeneModelling(x, mat, ModelRes)
Arguments
gr
perGene GRanges object
Author(s)
Inga Patarcic
BIMSBbioinfo/reg2gene documentation built on May 3, 2019, 6:42 p.m.
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Description Usage Arguments Author(s)
Description
It extracts gene-enhancer scores from metadata of GRanges object and filters NA values using stepwise.complete.cases() embedded in getGeneEnhScoresDF() Performs FILTERING: drop gene and NA is returned due to low or zero variation in gene expression or when no enhancers are remained after stepwise.complete.cases()
Usage
1 | perGeneModelling(x, mat, ModelRes)
|
Arguments
gr |
perGene GRanges object |
Author(s)
Inga Patarcic
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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