grlist2GI: convert GRangesList to GInteractions
In BIMSBbioinfo/reg2gene: Predicting the target genes for regulatory elements
Description
Usage
Arguments
Author(s)
Description
The function converts output of regActivityAroundTSS (a
GRangesList) to a GInteractions object by rearranging the rows and columns so
that output GInteractions object contains regulatory region coordinates
and an additional column "reg" which contains the gene info
Usage
1
grlist2GI(grlist)
Arguments
grlist
a GRangesList output from regActivityAroundTSS
Author(s)
Altuna Akalin, Inga Patarcic
BIMSBbioinfo/reg2gene documentation built on May 3, 2019, 6:42 p.m.
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Description Usage Arguments Author(s)
Description
The function converts output of regActivityAroundTSS (a
GRangesList) to a GInteractions object by rearranging the rows and columns so
that output GInteractions object contains regulatory region coordinates
and an additional column "reg" which contains the gene info
Usage
1 | grlist2GI(grlist)
|
Arguments
grlist |
a GRangesList output from |
Author(s)
Altuna Akalin, Inga Patarcic
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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