BarcUVa-Seq/FieldEffectCrc: Tumor, tumor-adjacent normal, and healthy colorectal transcriptomes as SummarizedExperiment objects
Processed RNA-seq data for 1,139 human primary colorectal tissue samples across three phenotypes, including tumor, normal adjacent-to-tumor, and healthy, available as Synapse ID syn22237139 on synapse.org. Data have been parsed into SummarizedExperiment objects available via ExperimentHub to facilitate reproducibility and extension of results from Dampier et al. (PMCID: PMC7386360, PMID: 32764205).
Getting started
Browse package contents
Package details |
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| Bioconductor views | ColonCancerData ExperimentData ExperimentHub ExpressionData Homo_sapiens_Data RNASeqData ReproducibleResearch SequencingData Tissue |
| Maintainer | |
| License | Artistic-2.0 |
| Version | 0.99.2 |
| URL | http://bioconductor.org/packages/release/bioc/html/FieldEffectCrc.html |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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