getConditions: Retrieves all patient clinical data from Condition table

In BenGlicksberg/ROMOP: A Light-Weight R Package for Interfacing with OMOP-Formatted Electronic Health Record Data

Description

Produces a table for relevant concepts contained in the 'condition_occurrence' table mapped through the data ontology for a patient list. Data retrieved include: condition_type, condition_status, etc.

Usage

getConditions(patient_list, declare = FALSE)

Arguments

patient_list	Comma-separated string of patient ids
declare	TRUE/FALSE will output status and data information during the process

Value

a table of relevant clinical data contained with in the 'condition_occurrence' table

Examples

ptCondData <- getConditions("1,2", declare=TRUE)

BenGlicksberg/ROMOP documentation built on March 6, 2020, 8:15 p.m.