makeDataOntology: Creates general data ontology

In BenGlicksberg/ROMOP: A Light-Weight R Package for Interfacing with OMOP-Formatted Electronic Health Record Data

Description

Creates general data ontology used by all data tables from the concept table. Option to save/load as .rds file.

Usage

makeDataOntology(declare = FALSE, store_ontology = FALSE)

Arguments

declare	TRUE/FALSE will output status and data information during the process
store_ontology	TRUE/FALSE If TRUE: will attempt to load .rds file from the current outDirectory; will create and save it if it does not exist. If FALSE: will build table.

Value

Returns a ontology table dictionary of concepts contained in the 'concept' table.

Examples

## Not run: 
dataOntology <- makeDataOntology(declare=FALSE,store_ontology=TRUE)

## End(Not run)

BenGlicksberg/ROMOP documentation built on March 6, 2020, 8:15 p.m.