getEncounters: Retrieves patient clinical encounter data

In BenGlicksberg/ROMOP: A Light-Weight R Package for Interfacing with OMOP-Formatted Electronic Health Record Data

Description

Compiles encounter data for a given patient list. Concepts are mapped through the created data ontology. Encounter data are retrieved from visit_occurence table and include: visit_type, encounter_type, etc.

Usage

getEncounters(patient_list, declare = FALSE)

Arguments

patient_list	Comma-separated string of patient ids
declare	TRUE/FALSE will output status and data information during the process

Value

table of mapped encounter concepts for specific patients contained in a provided csv formmated string of ids.

Examples

ptEncs <- getEncounters("1,2,3,4",declare=TRUE)

BenGlicksberg/ROMOP documentation built on March 6, 2020, 8:15 p.m.