R/makeTxDbPackage.R

In Bioconductor/GenomicFeatures: Query the gene models of a given organism/assembly

Defines functions makeTxDbPackageFromBiomart makeFDbPackageFromUCSC makeTxDbPackageFromUCSC makeTxDbPackage makePackageName supportedMiRBaseBuildValues

Documented in makeFDbPackageFromUCSC makePackageName makeTxDbPackage makeTxDbPackageFromBiomart makeTxDbPackageFromUCSC supportedMiRBaseBuildValues

### Everything in this file has moved to txdbmaker!

supportedMiRBaseBuildValues <- function()
{
    call_fun_in_txdbmaker("supportedMiRBaseBuildValues")
}

makePackageName <- function(...)
{
    call_fun_in_txdbmaker("makePackageName", ...)
}

makeTxDbPackage <- function(...)
{
    call_fun_in_txdbmaker("makeTxDbPackage", ...)
}

makeTxDbPackageFromUCSC <- function(...)
{
    call_fun_in_txdbmaker("makeTxDbPackageFromUCSC", ...)
}

makeFDbPackageFromUCSC <- function(...)
{
    call_fun_in_txdbmaker("makeFDbPackageFromUCSC", ...)
}

makeTxDbPackageFromBiomart <- function(...)
{
    call_fun_in_txdbmaker("makeTxDbPackageFromBiomart", ...)
}