RLSeq is a toolkit for analyzing and evaluating R-loop mapping datasets. RLSeq serves two primary purposes: (1) to facilitate the evaluation of dataset quality, and (2) to enable R-loop analysis in the context of publicly-available data sets from RLBase. The package is intended to provide a simple pipeline, called with the `RLSeq()` function, which performs all main analyses. Individual functions are also accessible and provide custom analysis capabilities. Finally an HTML report is generated with `report()`.
Package details |
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Bioconductor views | Classification Coverage Epigenetics Sequencing Transcriptomics |
Maintainer | |
License | MIT + file LICENSE |
Version | 1.3.0 |
URL | https://github.com/Bishop-Laboratory/RLSeq https://bishop-laboratory.github.io/RLSeq/ |
Package repository | View on GitHub |
Installation |
Install the latest version of this package by entering the following in R:
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