calculateRLE: calculate RLE of a numeric dataframe
In BrentLab/brentlabRnaSeqTools: Management/QC for brentlab RNAseq data
calculateRLE R Documentation
calculate RLE of a numeric dataframe
Description
calculate RLE of a numeric dataframe
Usage
calculateRLE(counts_df, log2_transformed_flag = FALSE)
Arguments
counts_df
gene by samples dataframe of raw counts or logged counts (see paramter logged)
log2_transformed_flag
Default FALSE set to true if log2 transformed counts are passed
Value
rle dataframe with genes x samples. Values are the logged differences from the gene-wise medians
BrentLab/brentlabRnaSeqTools documentation built on Aug. 20, 2023, 9:22 a.m.
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| calculateRLE | R Documentation |
calculate RLE of a numeric dataframe
Description
calculate RLE of a numeric dataframe
Usage
calculateRLE(counts_df, log2_transformed_flag = FALSE)
Arguments
counts_df |
gene by samples dataframe of raw counts or logged counts (see paramter logged) |
log2_transformed_flag |
Default FALSE set to true if log2 transformed counts are passed |
Value
rle dataframe with genes x samples. Values are the logged differences from the gene-wise medians
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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