htseq_proteinCodingTotal: Calculate KN99 protein coding total
In BrentLab/brentlabRnaSeqTools: Management/QC for brentlab RNAseq data
View source: R/ProcessingPipelineFunctions.R
htseq_proteinCodingTotal R Documentation
Calculate KN99 protein coding total
Description
Specifically for the 'old' pipeline with the 'old' annotations.
Usage
htseq_proteinCodingTotal(htseq_filename)
Arguments
htseq_filename
path to the htseq output for a given sample
Value
The summed total of reads over protein coding genes (no nctr RNA)
BrentLab/brentlabRnaSeqTools documentation built on Aug. 20, 2023, 9:22 a.m.
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View source: R/ProcessingPipelineFunctions.R
| htseq_proteinCodingTotal | R Documentation |
Calculate KN99 protein coding total
Description
Specifically for the 'old' pipeline with the 'old' annotations.
Usage
htseq_proteinCodingTotal(htseq_filename)
Arguments
htseq_filename |
path to the htseq output for a given sample |
Value
The summed total of reads over protein coding genes (no nctr RNA)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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