QC for brentlab RNAseq data

htseq_locusLog2cpm

R Documentation

Get the log2cpm of a given locus in the htseq output

Get the log2cpm of a given locus in the htseq output

htseq_locusLog2cpm(
  htseq_filename,
  gene_id,
  markers = c("CNAG_NAT", "CNAG_G418")
)

`htseq_filename`	filepath to htseq output
`gene_id`	gene id for which to return the log2cpm
`markers`	markers in library. Default CNAG_NAT, CNAG_G418

log2cpm of a given gene

BrentLab/brentlabRnaSeqTools documentation built on Aug. 20, 2023, 9:22 a.m.

BrentLab/brentlabRnaSeqTools index

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